Human Intermediate Filament Database

Intermediate Filament Details

Protein Name	keratin 73, K73
Former Protein Name	K6irs3
Gene Symbol	KRT73
Intermediate Filament Type	II
HGNC ID	28928
OMIM ID	*608247
NCBI Gene ID	319101

INTEGRATED SEQUENCE VIEW
Information last updated on 2009-07-21 17:11:59
* variant associated with disease as a risk factor rather than a causal factor.
Note: Sequences are numbered according to latest reference sequence information. Discrepancies may exist with some publications.
Chromosome 12q13.3
Chromosome Strand -
Chromosome GI 51511728
Chromosome RefSeq ID NC_000012.9
51298610 : TCAGCATCTT ATCCCCACTT TCTGGCCTCC CCACCATGAG CCGCCAATTC : 51298561 -35 : TCAGCATCTT ATCCCCACTT TCTGGCCTCC CCACCATGAG CCGCCAATTC : 15 1 : M S R Q F : 5 51298560 : ACCTACAAGT CGGGAGCTGC TGCCAAGGGG GGCTTCAGCG GCTGCTCCGC : 51298511 16 : ACCTACAAGT CGGGAGCTGC TGCCAAGGGG GGCTTCAGCG GCTGCTCCGC : 65 6 : T Y K S G A A A K G G F S G C S A : 22 51298510 : TGTGCTCTCA GGGGGCAGCT CATCCTCCTA CCGAGCAGGG GGCAAAGGGC : 51298461 66 : TGTGCTCTCA GGGGGCAGCT CATCCTCCTA CCGAGCAGGG GGCAAAGGGC : 115 23 : V L S G G S S S S Y R A G G K G : 38 51298460 : TCAGTGGAGG CTTCAGCAGT CGGAGCCTTT ACAGCCTGGG GGGTGCCCGG : 51298411 116 : TCAGTGGAGG CTTCAGCAGT CGGAGCCTTT ACAGCCTGGG GGGTGCCCGG : 165 39 : L S G G F S S R S L Y S L G G A R : 55 51298410 : AGCATCTCTT TCAATGTGGC CAGTGGCAGT GGGTGGGCAG GAGGCTATGG : 51298361 166 : AGCATCTCTT TCAATGTGGC CAGTGGCAGT GGGTGGGCAG GAGGCTATGG : 215 56 : S I S F N V A S G S G W A G G Y G : 72 51298360 : ATTTGGCCGG GGCCGGGCCA GTGGCTTTGC TGGCAGCATG TTTGGCAGTG : 51298311 216 : ATTTGGCCGG GGCCGGGCCA GTGGCTTTGC TGGCAGCATG TTTGGCAGTG : 265 73 : F G R G R A S G F A G S M F G S : 88 51298310 : TGGCCTTGGG GTCCGTGTGT CCGTCGTTGT GCCCGCCCGG GGGTATCCAT : 51298261 266 : TGGCCTTGGG GTCCGTGTGT CCGTCGTTGT GCCCGCCCGG GGGTATCCAT : 315 89 : V A L G S V C P S L C P P G G I H : 105 51298260 : CAGGTCACCA TCAACAAGAG CCTCCTGGCA CCCCTGAACG TGGAGCTGGA : 51298211 316 : CAGGTCACCA TCAACAAGAG CCTCCTGGCA CCCCTGAACG TGGAGCTGGA : 365 106 : Q V T I N K S L L A P L N V E L D : 122 51298210 : CCCTGAAATC CAGAAAGTGC GTGCCCAGGA GCGGGAGCAG ATCAAGGTGC : 51298161 366 : CCCTGAAATC CAGAAAGTGC GTGCCCAGGA GCGGGAGCAG ATCAAGGTGC : 415 123 : P E I Q K V R A Q E R E Q I K V : 138 51298160 : TGAACAACAA GTTCGCCTCC TTCATTGACA AGGTGGGTCT TTCTGGAGAA : 51298111 416 : TGAACAACAA GTTCGCCTCC TTCATTGACA AG : 447 139 : L N N K F A S F I D K : 149 51298110 : AGCTGATCTT GGGCTCCCCT TTTAAGGACT CAGGAGGGAG CCACTGCCCT : 51298061 51298060 : AATTTGTGGT TCAATTTGCC TGAGAGCAAG AAATCATTTT CTCCCAGCAA : 51298011 51298010 : AATCAGACAC CAGGTAAACA ACTTGAAAGC TCCCCAGGTG CTGGGCCCAT : 51297961 51297960 : AAGGCTTGCT CATGCCGTAG AGCCCCTTCC TTCCCCCGCC TTCATTGTCC : 51297911 51297910 : TTGGGGTGCT CCCTGTCTGA AGCAGACGAA GGCAGGACAC CTCCCCAGGA : 51297861 51297860 : TGCAGACATA GCCCAGGGAG GAACTGGACA AAGCCTGGAC ATCAGAGGCA : 51297811 51297810 : AGGGACCAGG GTTGGAGGGG TGAGAGGAGC CAGCAGCCTA GCCCAGGAAG : 51297761 51297760 : GTGTCCAGGA AGCAATGAGA GCGGTCTCTG AGTTGAGAAG TAGCAGAGTG : 51297711 51297710 : ACAGCCTGTG AGACTTAGAA GCTAGGCGAA GGAGATGCCC TTGACAGCCT : 51297661 51297660 : GGGGCATCTA GACTGCCATG CGACCCAGCT GTTCCTCCTG TGTCCCCTGA : 51297611 51297610 : AAGCTCAGAC TCAGTCCGTA ACACACACAG CCTATGAGGC AAGGCAGCTG : 51297561 51297560 : GAGGTCACGG TGCCCTAGAG CAGTGGTTCT CAAAGGTGGC CCTGGAACCA : 51297511 51297510 : GCAGCAGCAA CGTCACCTGG ACGCTTGTTA GAATGCACAC TCTCAGGCTC : 51297461 51297460 : CACCCCAGAG CAACTGAATC AGAGACTCTG CAGCAGGGCC CAGCACCCTG : 51297411 51297410 : CATTTTAACA AGCTCTCCAG GTGATGCTGA TGTACACTCA GGTTTGAGAA : 51297361 51297360 : TCACTGAGGA ACAAAGTGGT AGGAAGGTAT TGGGAAGCAG AGACTTCCTA : 51297311 51297310 : AGCTTAGAGG AGCAGGGGAA GCTCACCCGG AGCGACAGTG AGGTAGGGTG : 51297261 51297260 : GTGAGGCATG AGTAGGAGTT TTCAGATGGA GGTGGGGAAA AGGCAATCTA : 51297211 51297210 : GGGAGACAGC ACGTGCAGCA TGGTAGAACT TGTCTGGGGA ATGGGAGACC : 51297161 51297160 : TTCGGTTTAC GACATCACTG TATGAGTAAA GAAGGAAGCC AGGAGGGCTG : 51297111 51297110 : GGCACATTAT GAAGAGTGTG ATAAGGAATA TGGACTTGAC CCTGAGGGTG : 51297061 51297060 : ATGTGGAACC ACCTGAGGGT TTTAAGCAAG GGAATGATAT ATTTGTAGGT : 51297011 51297010 : TGCAACTTGA GAATGCTTGT TCTGCTGCTG GGACAATGCT GTGATTGAGA : 51296961 51296960 : TAGTAGAGAT TCAGACATGA AAGCAACTTA GGAGGGCCGG AGACCCCAGA : 51296911 51296910 : TAAGCTGAAC ATCTGCCTCT GGCTGGGCTG GGAGAGCCCA CGCACAAGGA : 51296861 51296860 : GGGAGAGACT AGGCAGAGCA CGGGCCACCA GACCCCGAGC AGAAGGCCTG : 51296811 51296810 : ACAGTGTGAA GGCTAGCACA GGCCAGCTTG TGTCTAAGGG GCTGCCTTGG : 51296761 51296760 : AGAGGTGGCC TGGACTGAAC ATGGACATCG GTCCAGGCAG GTTTGGATAA : 51296711 51296710 : GTGCAGAGGA GACAGGAGAT CTAGATCTTG ATAGTTTGAG AGGGAAATGA : 51296661 51296660 : AGACATTGGT GCCCCTCCCA ACCTTAAGGG CTGCCTCAGA GTGAGAACTT : 51296611 51296610 : CAGTCAGATA AAGGACCCTA GGTAAGGAGT GGGGGTGTGA GTGGCATGGG : 51296561 51296560 : TGGCAGTTTT TAAGGGCTGA GGCTCATTTT TAAAGCTAAT GTAGCATAAG : 51296511 51296510 : AAAACACAGT TCCTGTCCAG GAAGGGAATT CTCACATCCC CTCTCCACAT : 51296461 51296460 : TGCTTAAGTA TGTGTGGCAT GGGTTCCAGG TGCGGTTCCT GGAGCAGCAG : 51296411 448 : G TGCGGTTCCT GGAGCAGCAG : 468 150 : V R F L E Q Q : 156 51296410 : AACCAGGTGC TGGAGACCAA GTGGGAGCTG CTACAGCAGC TGGACCTGAA : 51296361 469 : AACCAGGTGC TGGAGACCAA GTGGGAGCTG CTACAGCAGC TGGACCTGAA : 518 157 : N Q V L E T K W E L L Q Q L D L N : 173 51296360 : CAACTGCAAG AATAACCTGG AGCCCATCCT TGAGGGCTAC ATCAGCAACC : 51296311 519 : CAACTGCAAG AATAACCTGG AGCCCATCCT TGAGGGCTAC ATCAGCAACC : 568 174 : N C K N N L E P I L E G Y I S N : 189 51296310 : TGCGGAAGCA GCTGGAGACG CTGTCTGGGG ACAGGGTGAG GCTGGACTCG : 51296261 569 : TGCGGAAGCA GCTGGAGACG CTGTCTGGGG ACAGGGTGAG GCTGGACTCG : 618 190 : L R K Q L E T L S G D R V R L D S : 206 51296260 : GAGCTGAGGA GCGTGCGCGA AGTGGTGGAG GACTACAAGA AGAGGTGAGC : 51296211 619 : GAGCTGAGGA GCGTGCGCGA AGTGGTGGAG GACTACAAGA AGAG : 662 207 : E L R S V R E V V E D Y K K R : 221 51296210 : AGGACGCCAC TCCAGGCTGG TCTGCCTCCC AGGGTGAGGC TTTCCCAGCA : 51296161 51296160 : GGCACTGGGA TGTTTGCCTC TGGCCTTGGA GGTATTGGGT TCATCTGTCC : 51296111 51296110 : CAGCAAGATG AGAGCCTTCT ATGGGCAACG AGGCAGACTA GACAGTGGAC : 51296061 51296060 : AACCAGCCTC TTGGGCAGCG TCAGGGCTGT CCTGGCAGGT GATCCCCTCC : 51296011 51296010 : TTGGCATGCT CCTTCCTGCT CCCTGTTCAA GGGAGCCTGT ATTGTGTGTG : 51295961 51295960 : CCGCAGCCTC TTGGCTCCTA AGCTCACCAC TGTGCCCCTG AGTTCCAAAG : 51295911 51295910 : AACCACCCCC CACCCACCCG CTGCTCTCTG CCACAGGGAA GGAGGTGGAG : 51295861 51295860 : TTCCTGTTGG GCTTCCTCTC TCATTGCCTT TCGGTCCTGG ACACGGGCCA : 51295811 51295810 : TGTGCCTTCT TTCTCCCCTG GGAGATAGTT CTGGCTTCCT TGGGACCCCT : 51295761 51295760 : GCCTAGGGAT GGAGGGGAGT TGTTGGTAGG TTGTCAGGCA GCAGGATTGA : 51295711 51295710 : CACAAGAATC ATGGCTGAAA GGGGTAGCTG GCATGCTTCT GTGATTCAGA : 51295661 51295660 : TACTGAGTGG GAAGAGGAAG AACCTACTCA CTCCCCAGGC ATCAGAGGAA : 51295611 51295610 : ATCAGACCTC AAACCACCCA GGCTCAGGAG GAGGTTACTT CATACCCGGC : 51295561 51295560 : CTCCAACTCT GGCCAAATAG TCCTGGTGTG TTGGGATGGA CTTGCAAAGG : 51295511 51295510 : TATAGAATAA TACCTCTTAA AAGGCATATA ATATGGGTAT CTCTTTTCTC : 51295461 51295460 : ATTTCACTAT GAGAACGTAT ACACACACAC ACAGACACAC ACTCTGCTTC : 51295411 51295410 : CTGTGATGCT TTCCCTGCAG GTATGAAGAA GAAATAAACA AGCGCACAAC : 51295361 663 : GTATGAAGAA GAAATAAACA AGCGCACAAC : 692 222 : Y E E E I N K R T T : 231 51295360 : TGCTGAGAAT GAATTTGTGG TGCTTAAGAA GGTGAGGAGG GTGCATGGGT : 51295311 693 : TGCTGAGAAT GAATTTGTGG TGCTTAAGAA G : 723 232 : A E N E F V V L K K : 241 51295310 : TCCCTTCAGT CCCCCAGCAG TGGGTGCTGG GCTAAGAGAG AGGAGCAGCT : 51295261 51295260 : GAGGTCTGAG CCCCCCGCAG AAGGGCCTGG AGCCAAAGTG CTGAAGGAGG : 51295211 51295210 : AGATGAAGGG CTTGCTGCTT GGGACATTTT GGGACACCTG GTGTTGGTTT : 51295161 51295160 : AGCACACAGT ACTTTGTCTG TGGACAGGAA CCTAGATGTG GATAGTCAGT : 51295111 51295110 : CCCAACTCAT GTCCCCTCTG GCTGGGGAAC AGGACAGGCT TTGGGAGGGG : 51295061 51295060 : CTGCAGGTTT GCCTTCCAAC TCTGCTAGTT TCTGGCAAAT CGCCGTGGCT : 51295011 51295010 : GTCCTTGCCT CCCTCTGTTG GCTGAATGAC TGGCTGAGTG GGGTATAGAG : 51294961 51294960 : TCTCACACCC TTCTCTGAGA AATAGAGGCA GAAGGAGTTC CAGAGGCATG : 51294911 51294910 : AGAAACTTGC CCCAGGTTTC GCAGTGAGTC TGACAGTGAA GTTGTGGCTG : 51294861 51294860 : GAAGGCCGGT TCCTGCCCCT TGGATCTGAA GTCCTGGGCA GCTAGCTAGG : 51294811 51294810 : GCAGGGCCTG CAGGTGTCAG TTCGCTGGAG AGGCCTGTCT GGGCTTGAAG : 51294761 51294760 : AAAGGTGAGG TCAGGGGTAT CTGGATTCTC CATAGGACGT GGACGCAGCT : 51294711 724 : GACGT GGACGCAGCT : 738 242 : D V D A A : 246 51294710 : TACACGAGCA AAGTGGAGCT GCAGGCCAAG GTGGATGCCC TGGATGGAGA : 51294661 739 : TACACGAGCA AAGTGGAGCT GCAGGCCAAG GTGGATGCCC TGGATGGAGA : 788 247 : Y T S K V E L Q A K V D A L D G E : 263 51294660 : AATCAAGTTC TTCAAGTGTC TGTACGAGGG GGTAAGGCTC CCCCTGCCCC : 51294611 789 : AATCAAGTTC TTCAAGTGTC TGTACGAGGG G : 819 264 : I K F F K C L Y E G : 273 51294610 : ACCTCTGGCT CTGTCTTCTG GAAGGACAGA TATGTGATGA ACAGTTTCTT : 51294561 51294560 : ACTTATCTGT AACTTAAGCA GTCCAGGGCA CCTCCAGCAT TGGGGTGCTG : 51294511 51294510 : AGAAATTTGT AGATCAAAGG TGGGAGTGGC CATCTATCCT GGTGCCCCAT : 51294461 51294460 : CCATCCCTGA CTGCCCTGAG GATGTCCTGC TTTCACTTCC TCCAGGAAAA : 51294411 51294410 : CAGAGTCCTT AAAGGGTTCC CACTGAACTT CAGCCAAGCA TATTCTCATT : 51294361 51294360 : CCTGCTTCTC TTCTCTCTGT GGCTGGGGAT GTTTCCTGGG GTCTTGGGCA : 51294311 51294310 : GGAATCCCCA GGGATAGAGG TAGGAAGTCC TCATACCCCT TCTGCCTTCT : 51294261 51294260 : CTATGTACAT CTGGTTTCAA GCCTCAACCT ATTGGCCAAG CATTTCTGGG : 51294211 51294210 : CTCCTGTGCC CCTTAGTGTC CCATGTGTGG CAGCCAGGCT GTTGTCTTCC : 51294161 51294160 : ACCTTCCCCA CTCCTGTCCT GTCTCAGGGG ACAGACATAT GGGCTGTTTT : 51294111 51294110 : CTTCCTGGGC TGCTTCAAAC CCATTCAGCA GTTTTCAGAT GTGGTATTGG : 51294061 51294060 : AACCTCTGGG CTGTGAGCTC TGTTCTTACA AGCTTTGGGA AGTGCAGCTT : 51294011 51294010 : CCATCTGTGT GGGATGGTCT AGGGCCATCC CTCTGGGACA GGGCCATCAC : 51293961 51293960 : CTTGGGACCT TTCTCTGGTC ACAGAAGGCA TTTCATGCTT CCTTGTTTCC : 51293911 51293910 : CCTGCAGGAG ACTGCTCAGA TCCAGTCCCA CATCAGCGAC ACGTCCATCA : 51293861 820 : GAG ACTGCTCAGA TCCAGTCCCA CATCAGCGAC ACGTCCATCA : 862 274 : E T A Q I Q S H I S D T S I : 287 51293860 : TCCTGTCCAT GGACAACAAC CGGAACCTGG ACCTGGACAG CATCATTGCT : 51293811 863 : TCCTGTCCAT GGACAACAAC CGGAACCTGG ACCTGGACAG CATCATTGCT : 912 288 : I L S M D N N R N L D L D S I I A : 304 51293810 : GAGGTCCGTG CCCAGTATGA GGAGATCGCC CGGAAGAGCA AGGCCGAGGC : 51293761 913 : GAGGTCCGTG CCCAGTATGA GGAGATCGCC CGGAAGAGCA AGGCCGAGGC : 962 305 : E V R A Q Y E E I A R K S K A E A : 321 51293760 : CGAGGCCCTG TACCAGACCA AGGTGAGGCC GCAAAACTCC CCATAGTGAA : 51293711 963 : CGAGGCCCTG TACCAGACCA AG : 984 322 : E A L Y Q T K : 328 51293710 : GTATGCAGGG CCCTCTGCTC CAGACTCTGT CTTGTCTGCC CCATGACTCA : 51293661 51293660 : CTGTGGTGGC CCATAGCTTG CTGGGAGCAC AGCACTCTCC TGGGCACTGG : 51293611 51293610 : GGGAAGCCAA AGGGGAGGAG AAGACACAGC TCTGTCCTTG GCACCCACTT : 51293561 51293560 : AGATCAACAG CACCCCTGGA GGATGCACTC AGCTGAGTGC AGGTGAATGT : 51293511 51293510 : GGTGTAAACA GAGTCCAGAC TGAGGAACTA GGACCAGGTG GGGCAGGTCA : 51293461 51293460 : GAAACCACTC CCTGGAGGCA GAGAGTTCTG TCTGGAGGGG AGAAGCCACA : 51293411 51293410 : TGAGTAGTTG GCATCTCAAC TCCCCCGCTA ATTATCATAA ATGAGGGGGT : 51293361 51293360 : CTCTTCAGTG TGATCTGGAA TCAAGTAATT TCTACCTTTT CATTCAAGTC : 51293311 51293310 : TAACTCCAAG GATAAAGCAG AAGTTTGAGG CCTCAGATCT TAACTCCCCT : 51293261 51293260 : AATGGTAGTG GGTGGGAAGT GATTCTTTAG ATAATTTGGT TTCTCAGATC : 51293211 51293210 : AAGATGGCAA CTTCCTGATT GTTCCTTGCT GTTTATCAGG CTCTTTCTCA : 51293161 51293160 : AGGGAATCCA CACTCTTGGG AGATCTTATC TCATCCCTCT CCCTGCCTCC : 51293111 51293110 : TTGCTAGCCT GCAGTGGTGG AGGAGAGAGG CTTTCAAGGT CTAGGAGACA : 51293061 51293060 : TAGGCTAGGG CTTCTTGGTA AAGGTTCAAA CTCAACTCTT CAGTCCCCAA : 51293011 51293010 : AGCCTTCCAC ATTAGTGTTG CAAGCTAGGG TCAGGAATGC CCAGAATCAT : 51292961 51292960 : AACAGTATTA TTATTGCTTA TTTTGATGAT TCCTTTTTAA AGATAAAGAA : 51292911 51292910 : CGTAGGGCCC AGGGAGTTCA AGCTACTTAC CAAAGGCAAT AGCTGACAAG : 51292861 51292860 : TGACGCAGCT GGATCAGAAT CTAGGTGACT GACTTCAAAT TCCACTGCAT : 51292811 51292810 : TTAGGCAGAA AATCAGAAGG TGACTCTGGG AAAGAAGCAT TTACTCTAAG : 51292761 51292760 : GGCTTTGTGT GGCTTGACAG AGGAGTGGCA GGAAGATGTT CATCTGTTTG : 51292711 51292710 : CCTCAGAATG AAGCTGCTTG GTGTCAGAAC CAGTGTACGG GGAGGCATCC : 51292661 51292660 : TGCTCACACA GCCTTGCGGA GAAGCAGGAG AAGGCCCCTT GTTTAGGGTT : 51292611 51292610 : GGCACCAAAG ATAAAATACA AGGAGTGAAG AGAGAAGCCC TTCTGCCTTC : 51292561 51292560 : TCTGCTTTCT GGATAACTTG ACATCTTTAG GAACAATCCT AAATCTTGGG : 51292511 51292510 : CCATGCTGGG GTGGAGCACC CAGTGACAGA GACAGAGCAG TACACCAGAG : 51292461 51292460 : TGCTGAAGGG TCCCTGTTTT GTTTTCCCCT TGAGCCACAT TCTGAGTAGA : 51292411 51292410 : ACTGATGTAC TCTCTGTGAC TGTTTAATAG ATGACAACAA AGACAGAAAT : 51292361 51292360 : AATCCCGAAT TAGTAGATGA CCTAAAATTC ATGGCTAGTG GTTTTGGGGT : 51292311 51292310 : ATAGCTGAAT CCACCCCCAT CATGCACACA AAATGTTCCT CCATGCTAAT : 51292261 51292260 : CCCTCCCTCC ATCCCAGCCC TGGAAAGCTG CCTGTGGGCT GGGGCCCAGC : 51292211 51292210 : TAAGGTATCA AAGGGAGGGA GTCACAGAAA ATACAGATGG ACAGCTCATT : 51292161 51292160 : GGCTCACTCA TTCATTCATC AGACTTTTTT TGAGCACCAA CTAGGCACTA : 51292111 51292110 : TGCTAGGTAC TGGGAATTCA AAGTTAAAAG AAAAAGTCTC TGTCATCCAT : 51292061 51292060 : TCATTCTGGG TCGGATGGAG AACACATGGA AACAGGTTCA CAATACACTA : 51292011 51292010 : CAGTGTGGGG AGACCTATGG ACTGGTGTGC CAGTGGCAAC GGAATAGAAT : 51291961 51291960 : TGCACCCAAC CAGGGCATCA CGGAAGGCCT CATGGAGGAA GGGACTCTGC : 51291911 51291910 : ACTGGTTAAG TTGGAGCTAG CTAGGGAAAA AGGAGGATGG ATGGGGGAGG : 51291861 51291860 : GTTTTTCAGG TCAGAGGAGA GGCTCAGGCA AAGACTCAGA GACAAAAGAA : 51291811 51291810 : CACGTGGGAC ATCTGGGGGA AGTGTGGGAC TGTTTGGCCG AGCTTGGGAG : 51291761 51291760 : TCAGATAGGT GTTAGGCAAG GGCAGAAAGA AATGAGCCCC TGGATGCCAT : 51291711 51291710 : GTAAGAGTTT GAATTTGACC TTGACTTTGA AGGACGATAG GCAGAGGAAC : 51291661 51291660 : GTCATAATTG GAGTAGTGTG TTATAAAGTT GCCATATGGA GAGTCTGGGA : 51291611 51291610 : CATTCAACAG TCCTTATGGC CAATTCTAAC CATCCATGAG ATCAGCTGTG : 51291561 51291560 : CTTAAGGCAA GCAAATGCAA TGGCCCAATG CTTTAATGGG AGGCTGCTGA : 51291511 51291510 : TAGACATGGT GAGGCGGGGG ACCTGGACCC ACCTCTGCCA GGCTCTGCAA : 51291461 51291460 : GTGCAGGCAC AGTCTCTGTA CCAGGCTGAT CCCAGCCAAG CCCTGAGTCA : 51291411 51291410 : GTGTTCTTGC TTTGGTTCCT TTTCCTCTAG TTCCAGGAGC TGCAGCTAGC : 51291361 985 : TTCCAGGAGC TGCAGCTAGC : 1004 329 : F Q E L Q L A : 335 51291360 : AGCCGGCCGG CATGGGGATG ACCTGAAACA CACCAAAAAT GAGATCTCAG : 51291311 1005 : AGCCGGCCGG CATGGGGATG ACCTGAAACA CACCAAAAAT GAGATCTCAG : 1054 336 : A G R H G D D L K H T K N E I S : 351 51291310 : AGCTGACCCG TCTCATCCAA AGACTGCGCT CGGAGATTGA GAGTGTGAAG : 51291261 1055 : AGCTGACCCG TCTCATCCAA AGACTGCGCT CGGAGATTGA GAGTGTGAAG : 1104 352 : E L T R L I Q R L R S E I E S V K : 368 51291260 : AAGCAGGTGA AGGGGACTGG AGCCTTCCTT ACTCACTCCT AAGGGAGGGG : 51291211 1105 : AAGCAG : 1110 369 : K Q : 370 51291210 : TGAACTGCTT AGCACCCCCT GCCCCCTCCT TCTCTTGAGC ATCCATTTCA : 51291161 51291160 : GAATCCCCTT CTTCAAATGG AGGTCCTGCT CTCATCCCTC ACCCTTAGCT : 51291111 51291110 : CCCATCTGAA GTTTGGAACA ATTGCAGATT ATTTTCATAA AGCTGTGGGG : 51291061 51291060 : CCCAGCGTAG CAAGCCTCTC AGTCTCAGGT TGACAGGACT CCACCTGGAT : 51291011 51291010 : GTGGCTGGGT CTCTGCTCCA GGACATGGGG CAGGACAGAG GAGGGCTCAA : 51290961 51290960 : CCATTGAGAG CATGGGAGAG GTGAAGCGAG GCCCAGGGAG GAACTCAGGG : 51290911 51290910 : AGAAATGCTA CCTCCTGACC CCAGTGTGCC AACCTGGAGA CGGCCATCGC : 51290861 1111 : TGTGCC AACCTGGAGA CGGCCATCGC : 1136 371 : C A N L E T A I A : 379 51290860 : TGACGCCGAG CAGCGGGGGG ACTGTGCCCT CAAGGATGCC AGGGCCAAGC : 51290811 1137 : TGACGCCGAG CAGCGGGGGG ACTGTGCCCT CAAGGATGCC AGGGCCAAGC : 1186 380 : D A E Q R G D C A L K D A R A K : 395 51290810 : TGGATGAGCT GGAGGGCGCC CTGCAGCAGG CCAAGGAGGA GCTGGCACGG : 51290761 1187 : TGGATGAGCT GGAGGGCGCC CTGCAGCAGG CCAAGGAGGA GCTGGCACGG : 1236 396 : L D E L E G A L Q Q A K E E L A R : 412 51290760 : ATGCTGCGCG AGTACCAAGA GCTTTTGAGC GTGAAGCTGT CCCTGGATAT : 51290711 1237 : ATGCTGCGCG AGTACCAAGA GCTTTTGAGC GTGAAGCTGT CCCTGGATAT : 1286 413 : M L R E Y Q E L L S V K L S L D I : 429 51290710 : TGAGATCGCC ACCTACCGCA AGCTGCTGGA GGGCGAGGAG TGCAGGTGGG : 51290661 1287 : TGAGATCGCC ACCTACCGCA AGCTGCTGGA GGGCGAGGAG TGCAG : 1331 430 : E I A T Y R K L L E G E E C R : 444 51290660 : TGGGACCGAG GGACTGGAAG AAACTGCAAG TCTCCACCTT AAAGTTTCCC : 51290611 51290610 : AGAGTGTGGT TGGGGGCGGG GGGGAGGGGG CGGCGAGCTG GCGATGTGTT : 51290561 51290560 : TACTTCACCC ACAAGCATAG TTTCAAACAG CATCCTGCCA GATAATGTGA : 51290511 51290510 : CAGCAATTTC CTTTACAGTT CTCTTTTGAC TCTTTGGAGA AAGTCTTAGC : 51290461 51290460 : TGGGTGCTGT TGTGTCTTTA ACACCTCTCA GATGGCCAGG CGCAGTGGTT : 51290411 51290410 : CGTGCCTGTA ATCCCAGCAC TTTGGGAGGC TGAGGCGGGT GGATCACCTG : 51290361 51290360 : AGGTCAGGAG TTTGAGACCA GCCTGGCCAA CATTGGAGAA ACCTCGTCTC : 51290311 51290310 : TACTAAAAAT ACAAAAGTTA GCTGGATGTG GTGGTGCATG CCTGTAATCT : 51290261 51290260 : TAGCTACTTG GGAGGCTGAG TCAGGAGAAT CGCTTGAACC CAGGAGGCTG : 51290211 51290210 : AGGTTGCAGT GAGCTGAGAT CCTGCTACTG TCCTCCAGCT TGGGTGACAG : 51290161 51290160 : AATGAGACTC CATCTCAAAA ACAAACAAAC AAACAAACAA ACAAACAGAC : 51290111 51290110 : AAAACACAAA AACACCTCTC AGACACTTAC AAATATCCCC TATTGATAAA : 51290061 51290060 : GAGACAGTAG ATCTCAGGTG CAGCATCTCT GGGAAAATAA TAGCATTATT : 51290011 51290010 : TAGCCCAAAA GTTTTAAATT GTTTTCTTTT CATTATATTT ATTTTTACTG : 51289961 51289960 : CTACTTTTTT TCTTATTTGG TTAGGTAATA ATACTGGTTT CTATTTACCC : 51289911 51289910 : TGGTGATAAA AAACTTCTTT TTAAAAGAAA TGCACTTTTG TCGTAAAAGG : 51289861 51289860 : CAGAGTCAAT TAAAAATACT AAATATCTAA CAGTACAAGT CAAACATGGT : 51289811 51289810 : CCTAGCAACA GTCAGAAGGG TGGCACACGA AGCATGAACA TTTGAAAAAC : 51289761 51289760 : CCTGTTCTAA CCAAGCACCA TTTTATAACT GAGACCTGGA GAGAAGTCAC : 51289711 51289710 : TTGCCCCAAA ATCATACAGT TCGTTCATTA GTAGCAACTC CTGATCCTGA : 51289661 51289660 : TCTTTCCACA TATGTATTTA TTCAGACAGC TGCTCACAGT AGTAAAGAAA : 51289611 51289610 : TGGGTTCAAG AGAAACCCTG CAGGAGGGAC CTTGGGGGTG GTAATGTTGT : 51289561 51289560 : TGGGGGTTCC AAAGTTGCAG GTTCCACATC TCTGCAGTGG GAAGAGTAGA : 51289511 51289510 : TTGAGGAGCG AGAGGGAGGG CTTAGAGACA TGCAAGGGCA GCCAGTGCCA : 51289461 51289460 : TCTGGCAAGT GTGGGGTGCG TGAAGGCTGA GCTGGTCTGG CTGGGGATCC : 51289411 51289410 : CCAGCCTGTG TTTAGGCAGT GAGGGCCACT ATGGGAGTCC ACGTGATTCA : 51289361 51289360 : GACTCTCCTG TGCTTTTCTC TCTTGCAGGA TGTCCGGAGA ATATACCAAC : 51289311 1332 : GA TGTCCGGAGA ATATACCAAC : 1353 445 : M S G E Y T N : 451 51289310 : TCCGTGAGCA TTTGTGAGTA TTTCATGACT CTGAGGGAAT ACTTTTAGTC : 51289261 1354 : TCCGTGAGCA TTT : 1366 452 : S V S I : 455 51289260 : CATCAACAAA CACAAAGTGG GTGGGTGTCC ACCGCCCAGC CCCCTGAGGA : 51289211 51289210 : AGAGCTTGGC TCTGCCTGTT GACCACTTGG TCACATACTC ACCTTCCTTG : 51289161 51289160 : CTGAGACCTG CGGCCTCCCC ATTCAGAGCT ACTTCTTCCA GGTGGAGCTA : 51289111 51289110 : GTGCCCAGGA CATTCTGATA CTGCACACTA GCCTCTTTCA TAGCAATCTC : 51289061 51289060 : CTGCCTGCTG TGGTGAAACT CTCAGCCCCT CCCCTCTTCT GTCACCCCCA : 51289011 51289010 : CACCGGCTCT CCTGCATGAA GGAAACTGAG CACAGAGTGG TGCCTCCTCA : 51288961 51288960 : ATGGGAGTGG AGACTGGTGT GTGGACCACT GTGCAAGCCA GTTTAATGCT : 51288911 51288910 : GGCCCCACAG GGTTTGGCAG TCTCTTTCTT ATAGTGGGAC CAGCAGAAAC : 51288861 51288860 : TCCCTAATTT TAACAATCAG GAAATTCTTT TGAAAAATAC TCAGAAGGTA : 51288811 51288810 : TTGTAAAGCT AAATGCAAGA ACCTGCTGGC TTATCTGATG CTCAAGCATC : 51288761 51288760 : ATCTGTCCCC TGGGGAAAGC CCTTGCTACT CCTGTTTGTT CATAGAATGA : 51288711 51288710 : CAAGGTGACT GACTTGGGAG TCTTGCAGGA CTGGGGCTAT TCTTCCCGCG : 51288661 51288660 : CTTGAGTTGC TCAAATGAAC CCAAGTTCAT GGTTGATGGG AAGTGTTTGC : 51288611 51288610 : TTAAGAAGGA GGTATTTAAG CTAGTGGGGC TGGGAGGTTG GAGGGGGACT : 51288561 51288560 : TAAGGCCACC TCTGTCCTGG GATATACACT GATCACTCGT CCCTCCCTCC : 51288511 51288510 : TCTGCAGCGG TCATCAACAG CTCCATGGCC GGGATGGCAG GCACAGGGGC : 51288461 1367 : CGG TCATCAACAG CTCCATGGCC GGGATGGCAG GCACAGGGGC : 1409 456 : S V I N S S M A G M A G T G A : 470 51288460 : TGGCTTTGGA TTCAGCAATG CTGGCACCTA CGGCTACTGG CCCAGCTCTG : 51288411 1410 : TGGCTTTGGA TTCAGCAATG CTGGCACCTA CGGCTACTGG CCCAGCTCTG : 1459 471 : G F G F S N A G T Y G Y W P S S : 486 51288410 : TCAGCGGGGG CTACAGCATG CTGCCTGGGG GCTGTGTCAC TGGCAGTGGG : 51288361 1460 : TCAGCGGGGG CTACAGCATG CTGCCTGGGG GCTGTGTCAC TGGCAGTGGG : 1509 487 : V S G G Y S M L P G G C V T G S G : 503 51288360 : AACTGTAGCC CCCGTGGGGA AGCCAGGACC AGGCTGGGGA GTGCAAGTGA : 51288311 1510 : AACTGTAGCC CCCGTGGGGA AGCCAGGACC AGGCTGGGGA GTGCAAGTGA : 1559 504 : N C S P R G E A R T R L G S A S E : 520 51288310 : ATTCAGGGAC TCCCAGGGAA AGACCTTAGC TCTAAGCTCA CCCACCAAAA : 51288261 1560 : ATTCAGGGAC TCCCAGGGAA AGACCTTAGC TCTAAGCTCA CCCACCAAAA : 1609 521 : F R D S Q G K T L A L S S P T K : 536 51288260 : AAACCATGAG ATAAAAGTGC AACACAGCCC ATTTCCCAGT AGTCTGCCTT : 51288211 1610 : AAACCATGAG ATAAAAGTGC AACACAGCCC ATTTCCCAGT AGTCTGCCTT : *36 537 : K T M R : 540 51288210 : GCCCTGGCAG ACTGCTCCGG ACTCTTCTAG GAAATTCCTC TGTCTCATTT : 51288161 *37 : GCCCTGGCAG ACTGCTCCGG ACTCTTCTAG GAAATTCCTC TGTCTCATTT : *86 51288160 : GTCCTCATCT CCTTCTTGCT TTGCTTTGCT GTGGACCTCT CCTCCTTCTC : 51288111 *87 : GTCCTCATCT CCTTCTTGCT TTGCTTTGCT GTGGACCTCT CCTCCTTCTC : *136 51288110 : CTTGACCTCT CTGCCTCAGT CTTTGTTAAT GTTGAATCAG GATTTGAGAG : 51288061 *137 : CTTGACCTCT CTGCCTCAGT CTTTGTTAAT GTTGAATCAG GATTTGAGAG : *186 51288060 : CTGGAGCCCA TCTTTCTGCC TCCATCCAAA GAGGCCTTTT AACTCAGCCT : 51288011 *187 : CTGGAGCCCA TCTTTCTGCC TCCATCCAAA GAGGCCTTTT AACTCAGCCT : *236 51288010 : CCCCTTCTGG AAGAAGACTT GGCCTTTTCT CTGCCTGCAT GTCCCTGTGC : 51287961 *237 : CCCCTTCTGG AAGAAGACTT GGCCTTTTCT CTGCCTGCAT GTCCCTGTGC : *286 51287960 : AGAGGAAGGC TGTCTCTCAA GGGTAACCCC AATCTGCCTG TGCTGCTCTT : 51287911 *287 : AGAGGAAGGC TGTCTCTCAA GGGTAACCCC AATCTGCCTG TGCTGCTCTT : *336 51287910 : TCATACCCTG TCTCAGTAAC TATTTGGCCA TGTGCTCCCT GGGTACACAA : 51287861 *337 : TCATACCCTG TCTCAGTAAC TATTTGGCCA TGTGCTCCCT GGGTACACAA : *386 51287860 : GTTTTCAGAT CTACTGATAG ACCTGCAGGA ACTCTCTCAT GTTAGAGCAA : 51287811 *387 : GTTTTCAGAT CTACTGATAG ACCTGCAGGA ACTCTCTCAT GTTAGAGCAA : *436 51287810 : TACTGGCTCA GGCAAAACAC CTGGTGGGAA GTTGTATCTT GTATAGCCAC : 51287761 *437 : TACTGGCTCA GGCAAAACAC CTGGTGGGAA GTTGTATCTT GTATAGCCAC : *486 51287760 : TGCATATTAC ATAGCCAGGA GTACCCCTTG AGGCTAATTC TACCAACCAA : 51287711 *487 : TGCATATTAC ATAGCCAGGA GTACCCCTTG AGGCTAATTC TACCAACCAA : *536 51287710 : GGGATTTGTG CTCTTCATCT GTGGGTACTT GTCCTTGTTT AGGCCTCACC : 51287661 *537 : GGGATTTGTG CTCTTCATCT GTGGGTACTT GTCCTTGTTT AGGCCTCACC : *586 51287660 : TCCCTGCTCC TGTGTCTTAC CAATAAACTT ATAAAGCCCA ---------- : 51287621 *587 : TCCCTGCTCC TGTGTCTTAC CAATAAACTT ATAAAGCCCA AAAAAAAAAA : *636 51287621 : ---------- ---------- --------- : 51287621 *637 : AAAAAAAAAA AAAAAAAAAA AAAAAAAAA : *665
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mRNA SEQUENCE
Reference sequence last updated on 2009-07-21 17:11:59
RefSeq ID NM_175068.2
GI 31341282
Length 2323 nucleotides
Download File | Text
Sequence
Legend: Blue = CDS, Red = UTR
-35 TCAGCATCTT ATCCCCACTT TCTGGCCTCC CCACCATGAG CCGCCAATTC 15 16 ACCTACAAGT CGGGAGCTGC TGCCAAGGGG GGCTTCAGCG GCTGCTCCGC 65 66 TGTGCTCTCA GGGGGCAGCT CATCCTCCTA CCGAGCAGGG GGCAAAGGGC 115 116 TCAGTGGAGG CTTCAGCAGT CGGAGCCTTT ACAGCCTGGG GGGTGCCCGG 165 166 AGCATCTCTT TCAATGTGGC CAGTGGCAGT GGGTGGGCAG GAGGCTATGG 215 216 ATTTGGCCGG GGCCGGGCCA GTGGCTTTGC TGGCAGCATG TTTGGCAGTG 265 266 TGGCCTTGGG GTCCGTGTGT CCGTCGTTGT GCCCGCCCGG GGGTATCCAT 315 316 CAGGTCACCA TCAACAAGAG CCTCCTGGCA CCCCTGAACG TGGAGCTGGA 365 366 CCCTGAAATC CAGAAAGTGC GTGCCCAGGA GCGGGAGCAG ATCAAGGTGC 415 416 TGAACAACAA GTTCGCCTCC TTCATTGACA AGGTGCGGTT CCTGGAGCAG 465 466 CAGAACCAGG TGCTGGAGAC CAAGTGGGAG CTGCTACAGC AGCTGGACCT 515 516 GAACAACTGC AAGAATAACC TGGAGCCCAT CCTTGAGGGC TACATCAGCA 565 566 ACCTGCGGAA GCAGCTGGAG ACGCTGTCTG GGGACAGGGT GAGGCTGGAC 615 616 TCGGAGCTGA GGAGCGTGCG CGAAGTGGTG GAGGACTACA AGAAGAGGTA 665 666 TGAAGAAGAA ATAAACAAGC GCACAACTGC TGAGAATGAA TTTGTGGTGC 715 716 TTAAGAAGGA CGTGGACGCA GCTTACACGA GCAAAGTGGA GCTGCAGGCC 765 766 AAGGTGGATG CCCTGGATGG AGAAATCAAG TTCTTCAAGT GTCTGTACGA 815 816 GGGGGAGACT GCTCAGATCC AGTCCCACAT CAGCGACACG TCCATCATCC 865 866 TGTCCATGGA CAACAACCGG AACCTGGACC TGGACAGCAT CATTGCTGAG 915 916 GTCCGTGCCC AGTATGAGGA GATCGCCCGG AAGAGCAAGG CCGAGGCCGA 965 966 GGCCCTGTAC CAGACCAAGT TCCAGGAGCT GCAGCTAGCA GCCGGCCGGC 1015 1016 ATGGGGATGA CCTGAAACAC ACCAAAAATG AGATCTCAGA GCTGACCCGT 1065 1066 CTCATCCAAA GACTGCGCTC GGAGATTGAG AGTGTGAAGA AGCAGTGTGC 1115 1116 CAACCTGGAG ACGGCCATCG CTGACGCCGA GCAGCGGGGG GACTGTGCCC 1165 1166 TCAAGGATGC CAGGGCCAAG CTGGATGAGC TGGAGGGCGC CCTGCAGCAG 1215 1216 GCCAAGGAGG AGCTGGCACG GATGCTGCGC GAGTACCAAG AGCTTTTGAG 1265 1266 CGTGAAGCTG TCCCTGGATA TTGAGATCGC CACCTACCGC AAGCTGCTGG 1315 1316 AGGGCGAGGA GTGCAGGATG TCCGGAGAAT ATACCAACTC CGTGAGCATT 1365 1366 TCGGTCATCA ACAGCTCCAT GGCCGGGATG GCAGGCACAG GGGCTGGCTT 1415 1416 TGGATTCAGC AATGCTGGCA CCTACGGCTA CTGGCCCAGC TCTGTCAGCG 1465 1466 GGGGCTACAG CATGCTGCCT GGGGGCTGTG TCACTGGCAG TGGGAACTGT 1515 1516 AGCCCCCGTG GGGAAGCCAG GACCAGGCTG GGGAGTGCAA GTGAATTCAG 1565 1566 GGACTCCCAG GGAAAGACCT TAGCTCTAAG CTCACCCACC AAAAAAACCA 1615 1616 TGAGATAAAA GTGCAACACA GCCCATTTCC CAGTAGTCTG CCTTGCCCTG *42 *43 GCAGACTGCT CCGGACTCTT CTAGGAAATT CCTCTGTCTC ATTTGTCCTC *92 *93 ATCTCCTTCT TGCTTTGCTT TGCTGTGGAC CTCTCCTCCT TCTCCTTGAC *142 *143 CTCTCTGCCT CAGTCTTTGT TAATGTTGAA TCAGGATTTG AGAGCTGGAG *192 *193 CCCATCTTTC TGCCTCCATC CAAAGAGGCC TTTTAACTCA GCCTCCCCTT *242 *243 CTGGAAGAAG ACTTGGCCTT TTCTCTGCCT GCATGTCCCT GTGCAGAGGA *292 *293 AGGCTGTCTC TCAAGGGTAA CCCCAATCTG CCTGTGCTGC TCTTTCATAC *342 *343 CCTGTCTCAG TAACTATTTG GCCATGTGCT CCCTGGGTAC ACAAGTTTTC *392 *393 AGATCTACTG ATAGACCTGC AGGAACTCTC TCATGTTAGA GCAATACTGG *442 *443 CTCAGGCAAA ACACCTGGTG GGAAGTTGTA TCTTGTATAG CCACTGCATA *492 *493 TTACATAGCC AGGAGTACCC CTTGAGGCTA ATTCTACCAA CCAAGGGATT *542 *543 TGTGCTCTTC ATCTGTGGGT ACTTGTCCTT GTTTAGGCCT CACCTCCCTG *592 *593 CTCCTGTGTC TTACCAATAA ACTTATAAAG CCCAAAAAAA AAAAAAAAAA *642 *643 AAAAAAAAAA AAAAAAAAAA AAA
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PROTEIN SEQUENCE AND DOMAIN INFORMATION
Reference sequence last updated on 2009-07-21 17:11:59
RefSeq ID NP_778238.1
GI 28173564
Isoelectric Point 7.2644
Molecular Weight 58923.2 Daltons
Length 540 amino acids
Download File | Text
Sequence
1 MSRQFTYKSG AAAKGGFSGC SAVLSGGSSS SYRAGGKGLS GGFSSRSLYS 50 51 LGGARSISFN VASGSGWAGG YGFGRGRASG FAGSMFGSVA LGSVCPSLCP 100 101 PGGIHQVTIN KSLLAPLNVE LDPEIQKVRA QEREQIKVLN NKFASFIDKV 150 151 RFLEQQNQVL ETKWELLQQL DLNNCKNNLE PILEGYISNL RKQLETLSGD 200 201 RVRLDSELRS VREVVEDYKK RYEEEINKRT TAENEFVVLK KDVDAAYTSK 250 251 VELQAKVDAL DGEIKFFKCL YEGETAQIQS HISDTSIILS MDNNRNLDLD 300 301 SIIAEVRAQY EEIARKSKAE AEALYQTKFQ ELQLAAGRHG DDLKHTKNEI 350 351 SELTRLIQRL RSEIESVKKQ CANLETAIAD AEQRGDCALK DARAKLDELE 400 401 GALQQAKEEL ARMLREYQEL LSVKLSLDIE IATYRKLLEG EECRMSGEYT 450 451 NSVSISVINS SMAGMAGTGA GFGFSNAGTY GYWPSSVSGG YSMLPGGCVT 500 501 GSGNCSPRGE ARTRLGSASE FRDSQGKTLA LSSPTKKTMR
Head L1 L12 L2 Tail
1A 1B 2A 2B
Domain Name Probable Starting Amino Acid Position Probable Ending Amino Acid Position
Head 1 132
1A 133 167
L1 168 179
1B 180 280
L12 281 297
2A 298 316
L2 317 324
2B 325 445
Tail 446 540
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RELATED SEQUENCES AND MULTIPLE SEQUENCE ALIGNMENT
The following table shows the orthologous sequences in other organisms as indicated by NCBI HomoloGene ID 27875.
Information last updated on 2007-08-17 12:30:45
Organism NCBI Gene ID mRNA Accession Protein Accession Taxonomy division
Rattus norvegicus 300248 NM_001008808.1 NP_001008808.1 Rodents
Mus musculus 223915 NM_212485.2 NP_997650.1 Rodents
Pan troglodytes 738254 XM_001142875.1 XP_001142875.1 Primates
Canis familiaris 608027 XM_844919.1 XP_850012.1 Mammals
Vertebrate ClustalW multiple sequence alignments
Multiple sequence alignments were created using ClustalW for vertebrate sequences and the results available for viewing, download and visualization. Please use the analysis tools to include other sequences.
Type of ClustalW alignment Download in FASTA format View file in FASTA format
Nucleotide file view
Protein file view

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