Human Intermediate Filament Database

Intermediate Filament Details

Protein Name	keratin 71, K71
Former Protein Name	K6irs1
Gene Symbol	KRT71
Intermediate Filament Type	II
HGNC ID	28927
OMIM ID	*608245
NCBI Gene ID	112802

INTEGRATED SEQUENCE VIEW
Information last updated on 2009-07-21 16:58:43
* variant associated with disease as a risk factor rather than a causal factor.
Note: Sequences are numbered according to latest reference sequence information. Discrepancies may exist with some publications.
Chromosome 12q13.13
Chromosome Strand -
Chromosome GI 51511728
Chromosome RefSeq ID NC_000012.9
51233170 : CCTTCCTCCC TCCTGCATCT GAGCTTTGTC TCCACCAGCA ACATGAGCCG : 51233121 -42 : CCTTCCTCCC TCCTGCATCT GAGCTTTGTC TCCACCAGCA ACATGAGCCG : 8 1 : M S R : 3 51233120 : CCAATTCACC TGCAAGTCGG GAGCTGCCGC CAAGGGGGGC TTCAGTGGCT : 51233071 9 : CCAATTCACC TGCAAGTCGG GAGCTGCCGC CAAGGGGGGC TTCAGTGGCT : 58 4 : Q F T C K S G A A A K G G F S G : 19 51233070 : GCTCAGCTGT GCTCTCAGGG GGCAGCTCAT CCTCCTTCCG GGCAGGGAGC : 51233021 59 : GCTCAGCTGT GCTCTCAGGG GGCAGCTCAT CCTCCTTCCG GGCAGGGAGC : 108 20 : C S A V L S G G S S S S F R A G S : 36 51233020 : AAAGGGCTCA GTGGGGGCTT TGGCAGCCGG AGCCTCTACA GCCTGGGGGG : 51232971 109 : AAAGGGCTCA GTGGGGGCTT TGGCAGCCGG AGCCTCTACA GCCTGGGGGG : 158 37 : K G L S G G F G S R S L Y S L G G : 53 51232970 : TGTCCGGAGC CTCAATGTGG CCAGTGGCAG CGGGAAGAGT GGAGGCTATG : 51232921 159 : TGTCCGGAGC CTCAATGTGG CCAGTGGCAG CGGGAAGAGT GGAGGCTATG : 208 54 : V R S L N V A S G S G K S G G Y : 69 51232920 : GATTTGGCCG GGGCCGGGCC AGTGGCTTTG CTGGAAGCAT GTTTGGCAGT : 51232871 209 : GATTTGGCCG GGGCCGGGCC AGTGGCTTTG CTGGAAGCAT GTTTGGCAGT : 258 70 : G F G R G R A S G F A G S M F G S : 86 51232870 : GTGGCCCTGG GGCCTGTGTG CCCAACTGTA TGCCCACCTG GAGGCATCCA : 51232821 259 : GTGGCCCTGG GGCCTGTGTG CCCAACTGTA TGCCCACCTG GAGGCATCCA : 308 87 : V A L G P V C P T V C P P G G I H : 103 51232820 : CCAGGTTACC GTCAATGAGA GCCTCCTGGC CCCCCTCAAC GTGGAGCTGG : 51232771 309 : CCAGGTTACC GTCAATGAGA GCCTCCTGGC CCCCCTCAAC GTGGAGCTGG : 358 104 : Q V T V N E S L L A P L N V E L : 119 51232770 : ACCCCGAGAT CCAGAAAGTG CGTGCCCAGG AGCGAGAGCA GATCAAGGCT : 51232721 359 : ACCCCGAGAT CCAGAAAGTG CGTGCCCAGG AGCGAGAGCA GATCAAGGCT : 408 120 : D P E I Q K V R A Q E R E Q I K A : 136 51232720 : CTGAACAACA AGTTCGCCTC CTTCATCGAC AAGGTGGGTC TTCTAGGGCC : 51232671 409 : CTGAACAACA AGTTCGCCTC CTTCATCGAC AAG : 441 137 : L N N K F A S F I D K : 147 51232670 : TGGGGAACTT GTGAACAGCC CTCCTCTTCT CTTCTTGGAA CATACGATTT : 51232621 51232620 : TGTTACAGCA GGAGAGATTG AGGTTAGATG TGAGGAAGAC TTTACTGTGG : 51232571 51232570 : ACAAGGTAGG TACATCCCAT CAACAGGGTG ACCTGTGTAA GGTTCTCTGT : 51232521 51232520 : GTTGTCTTTC CAGAGAGAAA ACAGAGGCAG GTCAATTTCT ACTGGCAGAG : 51232471 51232470 : GCTTCTCAGG GCTCCCAGCA AGAGATGTGG TCCTTCCTCT TGAGGGCTAG : 51232421 51232420 : CTTGGTGCCA TTGCTAGGCC TGCAGGCCGT GTGCAGAAAA GGCCTGTGAG : 51232371 51232370 : AGCCAGTCTC GCCCAGAGTA AGCAGGGAAG CTGTCCTCCT CCCCTGGCAT : 51232321 51232320 : GCTGCCCTGC CCACTGGTCA CTTGCCCAGC GGATCAGGAG CAGCAGGAAG : 51232271 51232270 : GGGCCGCTTC AGGCCCTCTG ATTGGGCATT TGCTCCAGTC AGTTGAAGAC : 51232221 51232220 : TTTCTTGAGA GGCAGAAGAG GGCACTGGGG AAGGGGACTC CACGGTGCTC : 51232171 51232170 : TTGTGCTCAC TGCTGGCCAC AGCTGAGTGG CTCTGGGAAG GTGATCTGCC : 51232121 51232120 : TGTCTGTGTT GCCATCTCCT CATCTCTAAA ATGGAGATAA TAACTTCTGT : 51232071 51232070 : CTTGGGGTTG TTGTCAGGCT TATAAAAGAA AATGCAGGTG AAGATCTTGT : 51232021 51232020 : CACAAGCCTG ACGCACACTA AATACTCCAA AAATGATTGT GATTGTGACT : 51231971 51231970 : CTCATTTCTT ATCTCTGGAA TGTGGGGGAG GGAAGCTCAG GGGAGGAATC : 51231921 51231920 : AAAGGTGTCT AGAGACCTGA AGAGATGACA CAGTCCAGAT AGGCCCCTGA : 51231871 51231870 : CTTCTGGCAG AGAAGAAATG ATTATCCCTA TCGTATGAGT CACTGAAGGC : 51231821 51231820 : ATGGAGGTAA ATGGCATTCC CAGGGTCATT TGGGGAAAGG GAAGGGTGAG : 51231771 51231770 : GCTGGACCCT CAGCCTTTTG CCTCCAGACC CAGAGGAGGA GACTGGAGGG : 51231721 51231720 : TTCTGTTGGC TCTGTGGCAG TCAGGCACCA AGGACGGGTC AACCCAGGAC : 51231671 51231670 : AAAGTCTATG GGTGAGACGG TCATGTGGCC ATCAGAGCTT AGCCAGCTCC : 51231621 51231620 : TGCAGCTCAG ACTTCCTGCC TGGAGGAGTC CCTGCTGCCC TCGGCTCAGC : 51231571 51231570 : CTCAGGGGCT AGGACTGGCT CTGCGGCTTC TTATTCTTCT AAGCCTTTTC : 51231521 51231520 : ATATCTGCAA GATCAAAGTG TTCTGAGATG GGGTCTGGGT GATGGGAGTG : 51231471 51231470 : GACTGATTGA TTCTTGGCTC GGCTGGTCAA AACCTACAGA AGGATAAAGT : 51231421 51231420 : CTGGAGACAT GGGAAGAAAG ATGAACATGA GGAGGGTCAC ATCCTGTTTA : 51231371 51231370 : TAAAGATGGT CTGCCCAGAG GGAGGGGAAG GAGGCTGAAA GGCTTGGACA : 51231321 51231320 : GTTCCCAAAT AATTTCAGTC TCCAGAGATC AGTCCCTTAA CCTCAGGCAG : 51231271 51231270 : CCAGAGAAGA CGGGTAAATC CTTTCGGCAT CCAGATGTGT TCAGTAGTGC : 51231221 51231220 : AGGTGTGTAT TGTGGTGTCT CAGATGCAGG ATTTACTCTG TGGTTAATGC : 51231171 51231170 : TCAGCCTCGT AGATCACATG AAAAATTCAG GATTGGTTAA ACCAGACCAA : 51231121 51231120 : ATGCTGGAAG ACGGGCTAGA GACAAATTTT CGGGGAATAA TTCTATCTTG : 51231071 51231070 : ACACTGAATC TTAGATAGTT TTCCCATGTC TTGTGTTTCT GATGTTGGGG : 51231021 51231020 : AAGACAACCT TATTCAAGCA GTAGCTGTGC TCATGTAGAT TAAGGGAAGT : 51230971 51230970 : CACATTTTAA AAACTGTGCT CCCCATCCCC AAAAACCAAA CAAGAGGTGT : 51230921 51230920 : GTATGGACAT CTCCTTCTGG CCAGTTTCCT GCCTCAGTGA GGGGCTACAA : 51230871 51230870 : TGGGATCAGG AGCTCCATCT GTCCATCATG TTCCATGTGC CATGCTTGTT : 51230821 51230820 : GCAGAGAAGA TGGTTCTGGG GAGCAGGACC AAGGAGGGAG AGGAGGGGCT : 51230771 51230770 : ATAAGCAAAG ATGAAGCTGG TGCCTGCTCC AGGCATTTAA AATACCTAGA : 51230721 51230720 : AGCCCTTGGC CCAAGCCTTA CTGAGCTCTG ACATGCCCTG AAATGAAGAG : 51230671 51230670 : CAGACTTTTC TTCAGGATGG TCAACCTGTC CAAAATGGTG GACCCATCCT : 51230621 51230620 : GGCTTCTCTG CTGGTATTTT CAATCACAGC CAAGCCCTGA GTTGGTGCAA : 51230571 51230570 : CCATGGAGGG TGCTGGGTGA TTGCATGCAC GGGTTACAGG GACATGTGTC : 51230521 51230520 : TAGATTCAGT TCCGGGCTCC ACCGCTTCTT AAACTGTTGG GCCTTGGAAA : 51230471 51230470 : CAGCCGAAGT TGCTCTGTGT CTCAGTTTTC TCTCCATAGC AGAGGGTAAT : 51230421 51230420 : GATTTGCCCA CCTCTTTCAG CTCTATTGAG GAGAAAATGC AGATAGAAGC : 51230371 51230370 : TTTACACAAT GCCCTGTGAG AGACACGTGT GACTATTACT GCAAGGGTTC : 51230321 51230320 : AGCAGTTTCT GGGATCTGGG TTCCAGGTGC GGTTCCTGGA GCAGCAGAAC : 51230271 442 : GTGC GGTTCCTGGA GCAGCAGAAC : 465 148 : V R F L E Q Q N : 155 51230270 : CAGGTACTGG AGACCAAGTG GGAGCTGCTG CAGCAGCTGG ACCTGAACAA : 51230221 466 : CAGGTACTGG AGACCAAGTG GGAGCTGCTG CAGCAGCTGG ACCTGAACAA : 515 156 : Q V L E T K W E L L Q Q L D L N N : 172 51230220 : CTGCAAGAAC AACCTGGAGC CCATCCTCGA GGGCTACATC AGCAACCTGC : 51230171 516 : CTGCAAGAAC AACCTGGAGC CCATCCTCGA GGGCTACATC AGCAACCTGC : 565 173 : C K N N L E P I L E G Y I S N L : 188 51230170 : GGAAGCAGCT GGAGACGCTG TCTGGGGACA GGGTGAGGCT GGACTCGGAG : 51230121 566 : GGAAGCAGCT GGAGACGCTG TCTGGGGACA GGGTGAGGCT GGACTCGGAG : 615 189 : R K Q L E T L S G D R V R L D S E : 205 51230120 : CTGAGGAATG TGCGGGACGT AGTGGAGGAC TACAAGAAGA GGTGAGCAGG : 51230071 616 : CTGAGGAATG TGCGGGACGT AGTGGAGGAC TACAAGAAGA G : 656 206 : L R N V R D V V E D Y K K R : 219 51230070 : AGGAGTCCCC CTGTAACTGG ACAACTGCCC TTGTCCCTCC AAGGGACCCC : 51230021 51230020 : TGGCAGTCAC CCCAGCTTAA ATGCTTTGGA GGTCAGTGGA GGGCATTGTT : 51229971 51229970 : CTTGGTCATA TCAAGCAGAA TCACCCCAAC AAAACTCTGG AACTTGCTCT : 51229921 51229920 : CTGCTCCTCC AGCCTCTGGC CTGACTCTTA GGACAAATGC CCAGTGAGCT : 51229871 51229870 : GGGCAGTGGG CAGAGGGTTA TCTCTGGCTC TGGGTTTAGG GAATGTTTGG : 51229821 51229820 : GGAAACCACT CACGTTCTCC TCCCATGTAA GAGGAGGGTT AAGTGCATCT : 51229771 51229770 : GGCTCCAAGA CTGCTCTCAA GGGTAACTGA GGAAATGCAG ATTGGAGCGC : 51229721 51229720 : TTTGTCATTT GTAAAGCTGT ACTCAAATTT GGGGAGGGCA GTTCACATCC : 51229671 51229670 : TGGTTCCTCT GAGAGTCCCA CAGGGCATTC GCTCCATGTG CTCCTTCCTC : 51229621 51229620 : GTTTGCCAAG CTGGATCTTT AACAGTCTCA TTCTTCCAAA CTGGTTAGCA : 51229571 51229570 : TGTTCCCTCC TCCAGGAAGC CTTCCCCCAC TTACCCCTGC CCAGTACTCT : 51229521 51229520 : GCGGCCCCCA GCACCTGTAT CTTCTGATGG ACACGCTGCT CCTTGCTCAA : 51229471 51229470 : CGCTGCCCTG TGAAAGCAAG GGCTTTCAGT GAGATATTAA CCAATGAGCC : 51229421 51229420 : CTCGCCATTC CCACAGGTAT GAGGAGGAAA TCAACAAGCG GACAGCAGCA : 51229371 657 : GTAT GAGGAGGAAA TCAACAAGCG GACAGCAGCA : 690 220 : Y E E E I N K R T A A : 230 51229370 : GAGAACGAGT TTGTGCTGCT CAAGAAGGTG AGGGGAAGGC AGGCCCTGAG : 51229321 691 : GAGAACGAGT TTGTGCTGCT CAAGAAG : 717 231 : E N E F V L L K K : 239 51229320 : TCCCGGGGGC TGGCCTGGGA CCTGGAGGAA CAGAGCCTGC CAAGGTGCTC : 51229271 51229270 : TGTTAGCCCC CCTCAAGGTG AACTGATTCA GGAAGAGCAA GGTGAAGGCA : 51229221 51229220 : GAGAAAACTT GATGAAAGAC TATCCAGAAA AAAGAATGAA AAGGCAGGGA : 51229171 51229170 : GGGTGCCAGT GAGAGGACAC CTGACTGCAT GTCCAATGCA GCTGTGGTTT : 51229121 51229120 : GAACACGGAG AAGAATACAG AGGACAACAC TGAGGGGCTC CCCTGCAGCC : 51229071 51229070 : CCGGGACCCA GCTCAGACAC CACAGGCGCT TCATTCCTGC CGAGGGAACA : 51229021 51229020 : GATTCCCAGG GTGGGGTGGG GTAGGGCTGG GCCTTTGCTC CTTTGTCTCC : 51228971 51228970 : TTTCCCAAGG CAAAGTGAAG AGAAGAGAGT GACTCCTTCT TCACTCAGGG : 51228921 51228920 : AACCCAGGCA GGGATGGCTG CTGCCTTTTT GGCTGTACCA GCAGTGACAG : 51228871 51228870 : GGGATGGTGG GGGCATCTTT CAGGATGTGG ATGCTGCTTA CGCCAATAAG : 51228821 718 : GATGTGG ATGCTGCTTA CGCCAATAAG : 744 240 : D V D A A Y A N K : 248 51228820 : GTGGAACTGC AGGCCAAGGT GGAATCCATG GACCAGGAGA TCAAGTTCTT : 51228771 745 : GTGGAACTGC AGGCCAAGGT GGAATCCATG GACCAGGAGA TCAAGTTCTT : 794 249 : V E L Q A K V E S M D Q E I K F F : 265 51228770 : CAGGTGTCTC TTTGAAGCCG TAAGTCTGTC TGCCCACTTG GTTCATCTAG : 51228721 795 : CAGGTGTCTC TTTGAAGCC : 813 266 : R C L F E A : 271 51228720 : GGGAGGCTGG TGGGTTAAAC TCTATTCTAG GGGCTGCAGG AGACATGGAG : 51228671 51228670 : GCCCCAGCCC TCAGTGAGAC CCCTCAGTTA GCCAACCATC TCCCGCATCA : 51228621 51228620 : GACTTGCGAG GCTCCTAGGT CTGCACACTC TGAGTGGGAA GGGAATCGGC : 51228571 51228570 : CAGGCCCTTG CTCCACGGCA GTGGGAATCT CTCTGGGCCC AGCAGGGAAC : 51228521 51228520 : TTGCTTTGCC GCAAAGCACA CAGCCCTGGA TGGCAGCAGC CTTGGGTTCC : 51228471 51228470 : AGCCTCCAAG ATGGCATCAC CAGAATTTGC TCATCTTGTT TGGGGGTGGT : 51228421 51228420 : GGTTGGCTTC CGACAGCAGT TGAGCCGAGA GACCATTTCT GTGTCCCCTG : 51228371 51228370 : CAGGAGATCA CTCAGATCCA GTCCCACATC AGTGACATGT CTGTCATCCT : 51228321 814 : GAGATCA CTCAGATCCA GTCCCACATC AGTGACATGT CTGTCATCCT : 860 272 : E I T Q I Q S H I S D M S V I L : 287 51228320 : GTCCATGGAC AACAACCGGA ACCTAGACCT GGACAGCATC ATTGACGAAG : 51228271 861 : GTCCATGGAC AACAACCGGA ACCTAGACCT GGACAGCATC ATTGACGAAG : 910 288 : S M D N N R N L D L D S I I D E : 303 51228270 : TCCGCACCCA GTATGAGGAG ATTGCCTTGA AGAGTAAGGC CGAGGCTGAG : 51228221 911 : TCCGCACCCA GTATGAGGAG ATTGCCTTGA AGAGTAAGGC CGAGGCTGAG : 960 304 : V R T Q Y E E I A L K S K A E A E : 320 51228220 : GCCCTGTACC AGACCAAGGT GAGCTGGGCT GAGGTGGGGC CAGGGAGGGT : 51228171 961 : GCCCTGTACC AGACCAAG : 978 321 : A L Y Q T K : 326 51228170 : GATGCCAGCG GGCAGCAGAT GGAGACAGAT CGTGCCCAGA ATAGAAGCAG : 51228121 51228120 : TGTCCCAGTA AGTGTCTGTT GTGTTCTGAT CCCAAGATAC ATGCACTCCC : 51228071 51228070 : ACGACACACT CATGACTCTG TGCTTTGGGG TCCCCAGTTC CAAGAGCTTC : 51228021 979 : TTC CAAGAGCTTC : 991 327 : F Q E L : 330 51228020 : AGCTGGCAGC TGGCAGGCAT GGGGACGACC TCAAAAACAC CAAGAATGAA : 51227971 992 : AGCTGGCAGC TGGCAGGCAT GGGGACGACC TCAAAAACAC CAAGAATGAA : 1041 331 : Q L A A G R H G D D L K N T K N E : 347 51227970 : ATCTCGGAGC TCACTCGGCT CATCCAGAGA ATCCGCTCAG AGATCGAGAA : 51227921 1042 : ATCTCGGAGC TCACTCGGCT CATCCAGAGA ATCCGCTCAG AGATCGAGAA : 1091 348 : I S E L T R L I Q R I R S E I E N : 364 51227920 : CGTGAAGAAG CAGGTGAGAG CACGTTGGCC TTGGCCTGTG GTCAAGTGCA : 51227871 1092 : CGTGAAGAAG CAG : 1104 365 : V K K Q : 368 51227870 : GGGGAGCATG AGTAGAGGGG AGATGAGCTG CTGAGAACAT GGGCCTCCCA : 51227821 51227820 : GATCGCTGCC TGGGAGAAGA GAGAAGGCCA GTGAGGTCGC TGCCTCAAAC : 51227771 51227770 : ACCTGGAGCA GGACGTCCCT GGGGGCTACT CATCTCTGAC TCACTCCAAG : 51227721 51227720 : GACCTCAGCC TCGAAGCCCC TCCTTAGAAA GCCTCCTCGG CACTGGGCTA : 51227671 51227670 : AGACCTTCCC CCAGCGATGT ACCCTCCTGG CACCTGTGCT TCCCTGTATT : 51227621 51227620 : TGTCACACTT CCTGTTATTA CTGACACTGC CACTAGACTG AAAGGGGGCA : 51227571 51227570 : GGGAGCTGGC TGCTTTGTAC CCTGTTTCCC CAGCATCTAG CACAGTGCCT : 51227521 51227520 : GGCACATAGT TGCAGCTTGA TAAACATCTG TGGAGTTAAT GACTGAGATG : 51227471 51227470 : GAGAAATGGG CTCAGGGAGC ACCCATTAAG GTGCATTGTT AAGGATTGAC : 51227421 51227420 : TAGGGACTAC TCCCAGGAAT ATAGGATGCA GCCTCGGCTT GTAGGTGAGA : 51227371 51227370 : CACAAGATGT ACATATACGA TAGCAATGGC AGCGGCACCT ATTCTTCTAT : 51227321 51227320 : CGCACTTCAT CCTCACCAAG ACCCTGAGAG GCAACAGTTG CCCTCGCTGT : 51227271 51227270 : TGTTACAGAT GAGGAAACTG AGGCTCAGAG AGGATAAGGG GGTTACACAG : 51227221 51227220 : CTGGTAAGTG GCAGAGCTGT GATCTGAACC AAGGTCTCCT GACTCCTAGT : 51227171 51227170 : CCAGTGCTCC TTCTATTCTT TTGTGGGCTT TAACACTTAG TTGCTTTGTG : 51227121 51227120 : ATCTTGGACA GGTTACTTCT GCTCACTTCA CAGGGTGTTG CAAGGACTAA : 51227071 51227070 : ATGCGTTAAG TTATGTCAAT GGTATGTACA GTATTGAGCC TGGTGCTGGC : 51227021 51227020 : ATACACTAAG TGCTTGGCAA ATAACGGTTG CTCCCGGGGT GTGTCCTTCC : 51226971 51226970 : CTGTCCCCCT CGACTGTGGT GCCCTGTTCC TGGGCAGCTG CTGCCTTTGC : 51226921 51226920 : GTCTGCCACA GCATATTCGA CCATCTCTCC TCCCAGACCT AAACAACTCA : 51226871 51226870 : AGAGTATTGC TGTCATTCAT TTCGTGCCCT TGGCACAATA TGGCTGAATA : 51226821 51226820 : AATGTCTCTA TGCTGAACTA AAGTGGCGCT CAGGAGGGCA TGGCTGCATG : 51226771 51226770 : ATTTCCATCA CCCACACATC CAACACAGGG AATGGGGCTA GAGCTAAGGA : 51226721 51226720 : GGGAGGTGCC AGCCCCAGAA GGGGCTCTGC TGCAAGGAAG TGTGATGGTG : 51226671 51226670 : TGTGTAGGGT GGAGGCGGGC CACTCTGCCC CACTCTAAGG ACCCAGAGGG : 51226621 51226620 : ATTGGATGTG GATGGTTGCA GTGGCTCCTC CAAATTTTTC GACTTCACCA : 51226571 51226570 : ATTCCTTCCT TAGGCTTCCA ACCTGGAGAC AGCCATCGCT GATGCTGAGC : 51226521 1105 : GCTTCCA ACCTGGAGAC AGCCATCGCT GATGCTGAGC : 1141 369 : A S N L E T A I A D A E : 380 51226520 : AGCGGGGAGA CAACGCCCTG AAGGATGCCC GGGCCAAGCT GGACGAGCTG : 51226471 1142 : AGCGGGGAGA CAACGCCCTG AAGGATGCCC GGGCCAAGCT GGACGAGCTG : 1191 381 : Q R G D N A L K D A R A K L D E L : 397 51226470 : GAGGGCGCCC TGCACCAGGC CAAGGAGGAG CTGGCGCGGA TGCTGCGCGA : 51226421 1192 : GAGGGCGCCC TGCACCAGGC CAAGGAGGAG CTGGCGCGGA TGCTGCGCGA : 1241 398 : E G A L H Q A K E E L A R M L R E : 414 51226420 : GTACCAGGAG CTCATGAGCC TGAAGCTGGC CCTGGACATG GAGATCGCCA : 51226371 1242 : GTACCAGGAG CTCATGAGCC TGAAGCTGGC CCTGGACATG GAGATCGCCA : 1291 415 : Y Q E L M S L K L A L D M E I A : 430 51226370 : CCTATCGCAA GCTACTGGAG AGCGAGGAGT GCAGGTGGGC GGGGCGTGCC : 51226321 1292 : CCTATCGCAA GCTACTGGAG AGCGAGGAGT GCAG : 1325 431 : T Y R K L L E S E E C R : 442 51226320 : CAGACAGGAG GGCCCCAGGG GTTTGGGAAG ACCCAAAGGA GAAAGCCTAA : 51226271 51226270 : CACATCTCAA TCCAGAAGAG ATGAGTTCTT AGGAAGTGAT GGGGTGATGA : 51226221 51226220 : GGATAGAAAT AATCACAGTA ATTAACAATA CTACCATGAG TGGACATGAG : 51226171 51226170 : TATCCACTCA GTAGACTGTG AGAGCTTGCT TCATGGCAGG CACTATGCTA : 51226121 51226120 : TGTAGTAAGC TATGCAGATT TGCTCGTTCT TCCTGGGCAT ACTAGAAACA : 51226071 51226070 : ACCACCGCCC TGCTCCCTGC AAAACCCCAT TACTCTATTA GGCATTCTTG : 51226021 51226020 : TTCCCTCTTC CTGATCTGTC CATGTGCAGC TTGTTGGGGG TGTGCCGGGG : 51225971 51225970 : CAGCCACCCC AGCTTCCCCA GGGCTCTACA GGGATGGCAG GCTGGTGTGT : 51225921 51225920 : GGACCTGACA CGTGGGAGGT AGATACACTG CCCCTACGTG TGCACCTTTT : 51225871 51225870 : GTAAACTATT GTTTGACTAG GGTTGTTGTC TGGTTACCCC AAAGATTTGG : 51225821 51225820 : GGGTAGTCTC CAAAACTTCT CAGGCTCTGC TTGCATCAGA GAAGCTTTGG : 51225771 51225770 : AATTTCCACA GGTGCCTGTT GGGTCCAAAA ACCCACATAA GGCTGATGGT : 51225721 51225720 : GGCAGTAGCT TTAAAGAGAC TGAGCTGGAT GACTTCTCTT CTCCTCTTAT : 51225671 51225670 : TTTATTTCTC TCCTTAATAG GATGTCAGGA GAATTTCCCT CCCCTGTCAG : 51225621 1326 : GATGTCAGGA GAATTTCCCT CCCCTGTCAG : 1355 443 : M S G E F P S P V S : 452 51225620 : CATCTGTAAG TATTTGTATA CTTTCACCTA AAATTGTAAA ATCTGCAGCC : 51225571 1356 : CATCT : 1360 453 : I : 453 51225570 : TGGAAAGGAC CTTAGTGACA CCCTCTGTGT GCAGATGAGG GATCTAAGAA : 51225521 51225520 : CCAGAGAGGG AAAAGCTTTG CCTGAGATCA CAAAGCCAGA TGGCAGAGCC : 51225471 51225470 : ATGGCCAAAA TCGGCTTTCC TGACTCCCAG GCCAGGCCTC CTTTATTCTT : 51225421 51225420 : ATCCCTCTGA CTTTCTGTTC CTAGGGGATG GCAGCAATGG AAAGCTATTG : 51225371 51225370 : TCATGGGAAA GCAAGGGTTA TGTTGTAGAA AAATGATGCA TGGGTCTGTG : 51225321 51225320 : TGAGGCTTAG GGAGTCAGGT TTGCAAACTG CAACCAGACT TGGGCTTGGG : 51225271 51225270 : AAGTAGGGAG GGCTGAGGGA ATGAGAGAAT GAGGGATCTT AGAGGTCAAG : 51225221 51225220 : CTGGCAGTAT CAGATCACTG CATTGCTTAG CAGGGCTAAA AGAGTTAAAC : 51225171 51225170 : CAGAGCTTGG GAAAGATGCC TGCTGTGGGA CAGCTAGCAG GAGGAAGAGG : 51225121 51225120 : TTAGAGGCTG GGAAGTTTAG CAAAAAGGCT AATAGAAAGG GCAATGGGTG : 51225071 51225070 : GGTGTCCAGG AGGACAGGTA GGGGTATTGG TACCTGGACC AAGGAGTAGG : 51225021 51225020 : GCCTCTGAGC ATTAATGGGG CAAGACTCAG CCAGATTGGA TATAAGCCGA : 51224971 51224970 : ACAAGCCAAG GACAGAGCAT TAGGGAAGCT GTCTTTGGTA CATTCTCCCC : 51224921 51224920 : AGGGAGAGGG AGCGGGTGTG CACCTCCCCA CTCAGCTTCT CCAAGAAAAG : 51224871 51224870 : CCCTGTCTGC CCTGGGGAAA AGGAGGCCTC CCCAGCTCTC TGCCTGAGTG : 51224821 51224820 : GGTGTTGGCT TCGGCTCCTC CTGCAGCCAT CATCAGCAGC ACCAGTGGCG : 51224771 1361 : CCAT CATCAGCAGC ACCAGTGGCG : 1384 454 : S I I S S T S G : 461 51224770 : GCAGTGTCTA TGGCTTCCGG CCCAGCATGG TCAGCGGTGG CTATGTGGCC : 51224721 1385 : GCAGTGTCTA TGGCTTCCGG CCCAGCATGG TCAGCGGTGG CTATGTGGCC : 1434 462 : G S V Y G F R P S M V S G G Y V A : 478 51224720 : AACAGCAGCA ACTGCATCTC TGGAGTGTGC AGCGTGAGAG GCGGGGAGGG : 51224671 1435 : AACAGCAGCA ACTGCATCTC TGGAGTGTGC AGCGTGAGAG GCGGGGAGGG : 1484 479 : N S S N C I S G V C S V R G G E G : 495 51224670 : CAGGAGCCGG GGCAGTGCCA ACGATTACAA AGACACCCTA GGGAAGGGTT : 51224621 1485 : CAGGAGCCGG GGCAGTGCCA ACGATTACAA AGACACCCTA GGGAAGGGTT : 1534 496 : R S R G S A N D Y K D T L G K G : 511 51224620 : CCAGCCTGAG TGCACCCTCC AAGAAAACCA GTCGGTAGAG AAGACTGCCC : 51224571 1535 : CCAGCCTGAG TGCACCCTCC AAGAAAACCA GTCGGTAGAG AAGACTGCCC : *12 512 : S S L S A P S K K T S R : 523 51224570 : CGGGCCCCGC CTCATTCCAT GACCCGGCTC TGGATCCCAC ACTGTACTTC : 51224521 *13 : CGGGCCCCGC CTCATTCCAT GACCCGGCTC TGGATCCCAC ACTGTACTTC : *62 51224520 : CCACAGCCCA CTCTCAGCTC CATCTCCACC CTGCTGGTCC TGCTCCCATA : 51224471 *63 : CCACAGCCCA CTCTCAGCTC CATCTCCACC CTGCTGGTCC TGCTCCCATA : *112 51224470 : CACCTGGCAC TGGCCTTGGC CACCCACTTC TCCCAGCCTG TGTCTTCCTG : 51224421 *113 : CACCTGGCAC TGGCCTTGGC CACCCACTTC TCCCAGCCTG TGTCTTCCTG : *162 51224420 : ATCCTGGGAA GGCCTGGATG ACCAAGCTTG GTGAAATTCC TCCCTGTACA : 51224371 *163 : ATCCTGGGAA GGCCTGGATG ACCAAGCTTG GTGAAATTCC TCCCTGTACA : *212 51224370 : CACCCTATTA ACTCCTTGGC TGTGGTCCCC CAGCTACACC ACCAGCCCAG : 51224321 *213 : CACCCTATTA ACTCCTTGGC TGTGGTCCCC CAGCTACACC ACCAGCCCAG : *262 51224320 : GTCCTGGCTG CCAGCTTTCC TCCTCTGCCC GGCCTCTAGC GCAGTCGCTA : 51224271 *263 : GTCCTGGCTG CCAGCTTTCC TCCTCTGCCC GGCCTCTAGC GCAGTCGCTA : *312 51224270 : ACTACTCTGC TGGGCTCCCT GGGTCTCTGC CCAAGGCCCC GCACACACTG : 51224221 *313 : ACTACTCTGC TGGGCTCCCT GGGTCTCTGC CCAAGGCCCC GCACACACTG : *362 51224220 : GGACCTAGCA TAGTTCCTGC CTATGCCAGG AGCTGGCTCT GTGTTTAAGA : 51224171 *363 : GGACCTAGCA TAGTTCCTGC CTATGCCAGG AGCTGGCTCT GTGTTTAAGA : *412 51224170 : AAAGGAGGAC TGAAGGACAA ACAACCAAGA GTGGCCCAGT CCCCACCCCC : 51224121 *413 : AAAGGAGGAC TGAAGGACAA ACAACCAAGA GTGGCCCAGT CCCCACCCCC : *462 51224120 : ACATCTAGCT CAGTCTCAAA TCTGAGTGGG ACCAAGTGCA ATTCAGGGCC : 51224071 *463 : ACATCTAGCT CAGTCTCAAA TCTGAGTGGG ACCAAGTGCA ATTCAGGGCC : *512 51224070 : TTTTTCTCCA CTCACCTGCA CCCAGAAGCA GAGAAAAGCA GGCACTGTTC : 51224021 *513 : TTTTTCTCCA CTCACCTGCA CCCAGAAGCA GAGAAAAGCA GGCACTGTTC : *562 51224020 : ACTTTTCCTT TATTCTTAAT GGCCTTCCTC TGTTGCAACC TCAATAAACA : 51223971 *563 : ACTTTTCCTT TATTCTTAAT GGCCTTCCTC TGTTGCAACC TCAATAAACA : *612 51223970 : GCACAATCTC A--------- --------- : 51223960 *613 : GCACAATCTC AAAAAAAAAA AAAAAAAAA : *641
Back to top

mRNA SEQUENCE
Reference sequence last updated on 2009-07-21 16:58:43
RefSeq ID NM_033448.1
GI 15618994
Length 2255 nucleotides
Download File | Text
Sequence
Legend: Blue = CDS, Red = UTR
-42 CCTTCCTCCC TCCTGCATCT GAGCTTTGTC TCCACCAGCA ACATGAGCCG 8 9 CCAATTCACC TGCAAGTCGG GAGCTGCCGC CAAGGGGGGC TTCAGTGGCT 58 59 GCTCAGCTGT GCTCTCAGGG GGCAGCTCAT CCTCCTTCCG GGCAGGGAGC 108 109 AAAGGGCTCA GTGGGGGCTT TGGCAGCCGG AGCCTCTACA GCCTGGGGGG 158 159 TGTCCGGAGC CTCAATGTGG CCAGTGGCAG CGGGAAGAGT GGAGGCTATG 208 209 GATTTGGCCG GGGCCGGGCC AGTGGCTTTG CTGGAAGCAT GTTTGGCAGT 258 259 GTGGCCCTGG GGCCTGTGTG CCCAACTGTA TGCCCACCTG GAGGCATCCA 308 309 CCAGGTTACC GTCAATGAGA GCCTCCTGGC CCCCCTCAAC GTGGAGCTGG 358 359 ACCCCGAGAT CCAGAAAGTG CGTGCCCAGG AGCGAGAGCA GATCAAGGCT 408 409 CTGAACAACA AGTTCGCCTC CTTCATCGAC AAGGTGCGGT TCCTGGAGCA 458 459 GCAGAACCAG GTACTGGAGA CCAAGTGGGA GCTGCTGCAG CAGCTGGACC 508 509 TGAACAACTG CAAGAACAAC CTGGAGCCCA TCCTCGAGGG CTACATCAGC 558 559 AACCTGCGGA AGCAGCTGGA GACGCTGTCT GGGGACAGGG TGAGGCTGGA 608 609 CTCGGAGCTG AGGAATGTGC GGGACGTAGT GGAGGACTAC AAGAAGAGGT 658 659 ATGAGGAGGA AATCAACAAG CGGACAGCAG CAGAGAACGA GTTTGTGCTG 708 709 CTCAAGAAGG ATGTGGATGC TGCTTACGCC AATAAGGTGG AACTGCAGGC 758 759 CAAGGTGGAA TCCATGGACC AGGAGATCAA GTTCTTCAGG TGTCTCTTTG 808 809 AAGCCGAGAT CACTCAGATC CAGTCCCACA TCAGTGACAT GTCTGTCATC 858 859 CTGTCCATGG ACAACAACCG GAACCTAGAC CTGGACAGCA TCATTGACGA 908 909 AGTCCGCACC CAGTATGAGG AGATTGCCTT GAAGAGTAAG GCCGAGGCTG 958 959 AGGCCCTGTA CCAGACCAAG TTCCAAGAGC TTCAGCTGGC AGCTGGCAGG 1008 1009 CATGGGGACG ACCTCAAAAA CACCAAGAAT GAAATCTCGG AGCTCACTCG 1058 1059 GCTCATCCAG AGAATCCGCT CAGAGATCGA GAACGTGAAG AAGCAGGCTT 1108 1109 CCAACCTGGA GACAGCCATC GCTGATGCTG AGCAGCGGGG AGACAACGCC 1158 1159 CTGAAGGATG CCCGGGCCAA GCTGGACGAG CTGGAGGGCG CCCTGCACCA 1208 1209 GGCCAAGGAG GAGCTGGCGC GGATGCTGCG CGAGTACCAG GAGCTCATGA 1258 1259 GCCTGAAGCT GGCCCTGGAC ATGGAGATCG CCACCTATCG CAAGCTACTG 1308 1309 GAGAGCGAGG AGTGCAGGAT GTCAGGAGAA TTTCCCTCCC CTGTCAGCAT 1358 1359 CTCCATCATC AGCAGCACCA GTGGCGGCAG TGTCTATGGC TTCCGGCCCA 1408 1409 GCATGGTCAG CGGTGGCTAT GTGGCCAACA GCAGCAACTG CATCTCTGGA 1458 1459 GTGTGCAGCG TGAGAGGCGG GGAGGGCAGG AGCCGGGGCA GTGCCAACGA 1508 1509 TTACAAAGAC ACCCTAGGGA AGGGTTCCAG CCTGAGTGCA CCCTCCAAGA 1558 1559 AAACCAGTCG GTAGAGAAGA CTGCCCCGGG CCCCGCCTCA TTCCATGACC *36 *37 CGGCTCTGGA TCCCACACTG TACTTCCCAC AGCCCACTCT CAGCTCCATC *86 *87 TCCACCCTGC TGGTCCTGCT CCCATACACC TGGCACTGGC CTTGGCCACC *136 *137 CACTTCTCCC AGCCTGTGTC TTCCTGATCC TGGGAAGGCC TGGATGACCA *186 *187 AGCTTGGTGA AATTCCTCCC TGTACACACC CTATTAACTC CTTGGCTGTG *236 *237 GTCCCCCAGC TACACCACCA GCCCAGGTCC TGGCTGCCAG CTTTCCTCCT *286 *287 CTGCCCGGCC TCTAGCGCAG TCGCTAACTA CTCTGCTGGG CTCCCTGGGT *336 *337 CTCTGCCCAA GGCCCCGCAC ACACTGGGAC CTAGCATAGT TCCTGCCTAT *386 *387 GCCAGGAGCT GGCTCTGTGT TTAAGAAAAG GAGGACTGAA GGACAAACAA *436 *437 CCAAGAGTGG CCCAGTCCCC ACCCCCACAT CTAGCTCAGT CTCAAATCTG *486 *487 AGTGGGACCA AGTGCAATTC AGGGCCTTTT TCTCCACTCA CCTGCACCCA *536 *537 GAAGCAGAGA AAAGCAGGCA CTGTTCACTT TTCCTTTATT CTTAATGGCC *586 *587 TTCCTCTGTT GCAACCTCAA TAAACAGCAC AATCTCAAAA AAAAAAAAAA *636 *637 AAAAA
Back to top

PROTEIN SEQUENCE AND DOMAIN INFORMATION
Reference sequence last updated on 2009-07-21 16:58:43
RefSeq ID NP_258259.1
GI 15618995
Isoelectric Point 6.5472
Molecular Weight 57291.4 Daltons
Length 523 amino acids
Download File | Text
Sequence
1 MSRQFTCKSG AAAKGGFSGC SAVLSGGSSS SFRAGSKGLS GGFGSRSLYS 50 51 LGGVRSLNVA SGSGKSGGYG FGRGRASGFA GSMFGSVALG PVCPTVCPPG 100 101 GIHQVTVNES LLAPLNVELD PEIQKVRAQE REQIKALNNK FASFIDKVRF 150 151 LEQQNQVLET KWELLQQLDL NNCKNNLEPI LEGYISNLRK QLETLSGDRV 200 201 RLDSELRNVR DVVEDYKKRY EEEINKRTAA ENEFVLLKKD VDAAYANKVE 250 251 LQAKVESMDQ EIKFFRCLFE AEITQIQSHI SDMSVILSMD NNRNLDLDSI 300 301 IDEVRTQYEE IALKSKAEAE ALYQTKFQEL QLAAGRHGDD LKNTKNEISE 350 351 LTRLIQRIRS EIENVKKQAS NLETAIADAE QRGDNALKDA RAKLDELEGA 400 401 LHQAKEELAR MLREYQELMS LKLALDMEIA TYRKLLESEE CRMSGEFPSP 450 451 VSISIISSTS GGSVYGFRPS MVSGGYVANS SNCISGVCSV RGGEGRSRGS 500 501 ANDYKDTLGK GSSLSAPSKK TSR
Head L1 L12 L2 Tail
1A 1B 2A 2B
Domain Name Probable Starting Amino Acid Position Probable Ending Amino Acid Position
Head 1 130
1A 131 165
L1 166 177
1B 178 278
L12 279 295
2A 296 314
L2 315 322
2B 323 443
Tail 444 523
Back to top

RELATED SEQUENCES AND MULTIPLE SEQUENCE ALIGNMENT
The following table shows the orthologous sequences in other organisms as indicated by NCBI HomoloGene ID 88864.
Information last updated on 2007-08-17 12:21:17
Organism NCBI Gene ID mRNA Accession Protein Accession Taxonomy division
Mus musculus 56735 NM_019956.1 NP_064340.1 Rodents
Vertebrate ClustalW multiple sequence alignments
Multiple sequence alignments were created using ClustalW for vertebrate sequences and the results available for viewing, download and visualization. Please use the analysis tools to include other sequences.
Type of ClustalW alignment Download in FASTA format View file in FASTA format
Nucleotide file view
Protein file view

Back to top