Human Intermediate Filament Database

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Human Intermediate Filament Database

Statistics

STATISTICS FOR INTERMEDIATE FILAMENT TYPE VI

Click here for the overall statistics.

Data by Intermediate Filament

Click here to download the table as a Microsoft Excel file.

Note: 'No. of Publications' and 'No. of Associated Diseases' are not additive as a single publication or disease may be common to multiple intermediate filament.

Intermediate Filament No. of Sequence Variants No. of Allelic Variants No. of Publications No. of Associated Diseases
Type VI 4 0 4 2
CP49/phakinin 3 0 3 1
filensin/CP115 1 0 1 1

Data by variant type

Click here to download the tables as a Microsoft Excel file.

Type of cDNA variation Number of unique proteins Number of variation records
Deletion 2 3
Substitution 1 1
Type of protein variation Number of unique proteins Number of variation records
Deletion 1 2
Frame shift 1 1
Substitution (Missense) 1 1

Data by affected domain

Click here to download the table as a Microsoft Excel file.

Domain name Number of unique proteins Number of variation records
1B 1 2
L2 1 1

Data by associated disease

Click here to download the table as a Microsoft Excel file.

Disease Number of variation records Unique intermediate filament proteins Stacked bars
ADC 3 CP49/phakinin
Autosomal recessive cataract 1 filensin/CP115

Nucleic acid substitution details
Chart Legend
A C G T

Nature of nucleic acid substitution

(Mouse over bars to see individual counts.)

Click here to download the table as a Microsoft Excel file.

Number in parenthesis indicates the percentage of the change in relation to all changes.

The darker the cell color, the higher the percentage change.

A C G T Total
A - 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00)
C 0
(0.00) - 0
(0.00) 1
(100.00) 1
(100.00)
G 0
(0.00) 0
(0.00) - 0
(0.00) 0
(0.00)
T 0
(0.00) 0
(0.00) 0
(0.00) - 0
(0.00)
Total 0
(0.00) 0
(0.00) 0
(0.00) 1
(100.00) 1
(100.00)

Amino acid substitution details
Chart Legend
Amino acids with electrically positively charged side chains : K      R      H
Amino acids with electrically negatively charged side chains : D      E
Amino acids with polar but uncharged side chains : S      T      N      Q
Amino acids with hydrophobic side chains : A      I      L      M      F      W      Y      V
Special cases : P      C      G
Stop Codon : X
Nature of amino acid substitutions
(Mouse over bars to see individual counts.)

Click here to download the table as a Microsoft Excel file.

Number in parenthesis indicates the percentage of the change in relation to all changes.

The darker the cell color, the higher the percentage change.

A C D E F G H I K L M N P Q R S T V W X Y Total
A - 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00)
C 0
(0.00) - 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00)
D 0
(0.00) 0
(0.00) - 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00)
E 0
(0.00) 0
(0.00) 0
(0.00) - 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00)
F 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) - 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00)
G 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) - 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00)
H 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) - 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00)
I 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) - 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00)
K 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) - 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00)
L 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) - 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00)
M 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) - 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00)
N 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) - 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00)
P 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) - 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00)
Q 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) - 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00)
R 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) - 0
(0.00) 0
(0.00) 0
(0.00) 1
(100.00) 0
(0.00) 0
(0.00) 1
(100.00)
S 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) - 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00)
T 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) - 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00)
V 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) - 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00)
W 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) - 0
(0.00) 0
(0.00) 0
(0.00)
X 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) - 0
(0.00) 0
(0.00)
Y 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) - 0
(0.00)
Total 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 0
(0.00) 1
(100.00) 0
(0.00) 0
(0.00) 1
(100.00)

Last modified: April 17 2009 14:28:40.

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